Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTTTGGGATGGAGAGAGGAGA&CTCCTATCAAACCTCCCAAAG
..(((((((.((.((.(((((.&))))).))...))))))))).
Details
MiRNAhsa-miR-6740-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site896,917
Score0.872
Seed1
Au0.603
Energy-19.9
Binding len21
Me-7.722
Phylopstem5.888413285714286
Phylopflank5.019526690000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure