Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGATGACAGTGGAGGCCT&AGGAGTATGGAGACCTCCACTGGTCGATAATCCT
.(((((((((((((((.((&.)).))))))))).))....)))).
Details
MiRNAhsa-miR-6744-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1227,1261
Score0.808
Seed1
Au0.544
Energy-21.7
Binding len25
Me-3.793
Phylopstem4.6410791
Phylopflank3.915342275
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure