Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCGGGAGAAGGAGGTGGCCTGG&CAGGCCGCAAGAGAGATAATCAATATGCATTTCCAAGCCTTTTGGC
(((((((..((((((((((((.&))))))))......................))))....))))))).
Details
MiRNAhsa-miR-6746-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site97,143
Score0.923
Seed1
Au0.632
Energy-21.6
Binding len46
Me-7.308
Phylopstem0.3515968617647059
Phylopflank1.0525586912499998
Longest consecutive pairings8
Position of longest consecutive pairings38
Pairings in 3prime end7
Position5UTR
2D Structure