Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACGGGGAGTCAGGCAGTGGTGGA&ACCTGCTGGCTGGCTTGATGATGAACCAAAATTTATCCCTGA
.(((((((((((.(((((((...&))).)))).))))).....................)))))).
Details
MiRNAhsa-miR-6777-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1050,1092
Score0.808
Seed1
Au0.574
Energy-23.8
Binding len42
Me-5.082
Phylopstem4.576272140625
Phylopflank4.7536493325
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure