Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTGGGAGGACAGGAGGCAGGT&GCCTCCTAGAGGATGTGGTTCCTCCTATC
.(((((((((((((((((....&)))))))..........)).)))))))).
Details
MiRNAhsa-miR-6778-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site875,904
Score0.846
Seed1
Au0.559
Energy-25.4
Binding len29
Me-3.793
Phylopstem4.730897453571429
Phylopflank4.92809340625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure