Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTGGGAGGACAGGAGGCAGGT&GCCTTTTGGCTATGTTTGGGTCTTCTGTTCATCTCAA
..((((((((((((((((((((&))))...............))))))))))).))))).
Details
MiRNAhsa-miR-6778-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site133,170
Score0.846
Seed1
Au0.647
Energy-22.2
Binding len37
Me-4.957
Phylopstem1.7622648972222223
Phylopflank0.8888455575
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure