Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGGGAGGGGCTGGGTTTGGC&CTTAATCCAGCATGTCGGATTGGGTGTGGTGAGTGGAAACCTCCCAT
.(((((((.((((((((.((.&)).))))))))............................))))))).
Details
MiRNAhsa-miR-6779-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1159,1206
Score0.846
Seed1
Au0.559
Energy-21.3
Binding len47
Me-4.85
Phylopstem1.8899065
Phylopflank3.590082776249999
Longest consecutive pairings8
Position of longest consecutive pairings36
Pairings in 3prime end6
PositionCDS
2D Structure