Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGCCCTGTCTCCTCCCATCT&GGATGGAGAATGGGAGGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTG
..((((.((((((((((((((&.))).)))))))...........................)))).)))).
Details
MiRNAhsa-miR-6779-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1131,1185
Score0.846
Seed0
Au0.515
Energy-21.5
Binding len49
Me-6.501
Phylopstem2.756505383333333
Phylopflank4.569428775
Longest consecutive pairings7
Position of longest consecutive pairings37
Pairings in 3prime end8
PositionCDS
2D Structure