Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGGGAGGGAAGACAGCTGGAGA&CTCCTAGAGGATGTGGTTCCTCCTAT
.(((((((((..(((.((((((.&))))....)).)))..))))))))).
Details
MiRNAhsa-miR-6780a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site877,903
Score0.962
Seed1
Au0.559
Energy-21.2
Binding len26
Me-10.198
Phylopstem5.702185555555555
Phylopflank4.8139146425
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure