Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCCTCTGTTTTCTTTCCTAG&AGGAAGAGAAAGCAGCCCTGGAA
.(((.((((((((((((((..&)))).))))))))))....))).
Details
MiRNAhsa-miR-6780a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1691,1714
Score0.923
Seed0
Au0.574
Energy-18.0
Binding len23
Me-7.912
Phylopstem3.9745929999999996
Phylopflank3.13432707125
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure