Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGGCCGGAGGTCAAGGGCGT&GTCTATGACCTCTGATATCTACTTTGATAATTTTATTATCTGTTCGG
((((((((((((((.((((..&)))).)))))))))...........................))))).
Details
MiRNAhsa-miR-6781-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1368,1415
Score0.846
Seed1
Au0.618
Energy-22.0
Binding len47
Me-4.673
Phylopstem2.861900043902439
Phylopflank3.7440519650000006
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end5
PositionCDS
2D Structure