Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGCGGGGGTAGAGCTGGCTGC&GCTGGCTGGCTTGATGATGAACCAAAATTTATCCCTGATCCT
.(((((((((((((((((((((&)).))))))))).................))))))))..)).
Details
MiRNAhsa-miR-6787-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1054,1096
Score0.923
Seed1
Au0.588
Energy-22.6
Binding len42
Me-3.793
Phylopstem4.401927536585366
Phylopflank4.5352239325
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end8
PositionCDS
2D Structure