Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCGCCACTTCCCTCCCTGCAG&CTGCGCGGCCGCCGGCGGGACTGGTCTGAAGAGACGCGGGGACCAAGTGGCA
...(((((((...(((((((..&.)))))))..))))))).
Details
MiRNAhsa-miR-6788-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site11,63
Score0.821
Seed0
Au0.382
Energy-24.8
Binding len18
Me-13.975
Phylopstem-0.06479494285714286
Phylopflank-0.102473495
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end6
Position5UTR
2D Structure