Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTAGGGGCGTCCCGGGCGCGCGGG&TCTGCCGTCAAACCAGAAGACTGGGATGAAAGTGAACCTGCC
(((((..(((((((((((.(((((&))))))))............))))))))........))))).
Details
MiRNAhsa-miR-6789-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site982,1024
Score0.846
Seed0
Au0.559
Energy-23.9
Binding len42
Me-7.382
Phylopstem5.354486173913043
Phylopflank5.344753612500002
Longest consecutive pairings8
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure