Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGCGCCCGTGTCTCCTCCAG&CTGGAATGAAGACACGGATGGAGAATGGGAGGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGTGGT
(.(((((((((((((((((((&)))))......................)))))))).............................)))))).).
Details
MiRNAhsa-miR-6789-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1116,1189
Score0.923
Seed1
Au0.515
Energy-24.6
Binding len73
Me-5.101
Phylopstem2.984729858571427
Phylopflank4.7090478075
Longest consecutive pairings8
Position of longest consecutive pairings38
Pairings in 3prime end8
PositionCDS
2D Structure