Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGGGACAGGATGAGAGGCTGT&AGCCTTTTGGCTATGTTTGGGTCTTCTGTTCATCTCAA
((((((((((((((((((((((..&)))))))))..............)))))))).))))).
Details
MiRNAhsa-miR-6795-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site132,170
Score0.846
Seed1
Au0.647
Energy-21.4
Binding len38
Me-3.938
Phylopstem1.7667061162162163
Phylopflank0.8964628812500001
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end6
PositionCDS
2D Structure