Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCAGGGGGATGGGCGAGCTTGGG&TTCAAGTGTTGTTAAACCTGCTGGC
((((.(((...((((((((((((&))))))).)))))...))).)))).
Details
MiRNAhsa-miR-6798-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1035,1060
Score0.923
Seed0
Au0.588
Energy-20.3
Binding len25
Me-13.18
Phylopstem6.480973615384615
Phylopflank4.682064506249999
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure