Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTAGGTGACAGTCAGGGGCGG&CGCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCG
(..(((((((((((((.....&.))))).))))))))..).
Details
MiRNAhsa-miR-6800-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site45,93
Score1.0
Seed0
Au0.515
Energy-18.3
Binding len19
Me-6.659
Phylopstem0.6370876428571428
Phylopflank0.35837418583333336
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end3
Position5UTR
2D Structure