Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGCATTCCTGCTTGGCCCAG&GGGCACCCATGGCTTTGGTTGATTTATCTTGTGACAGCAGGAGTGCC
....((((((((((.((((((..&))))..............................)))))))))))).
Details
MiRNAhsa-miR-6807-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1522,1569
Score0.846
Seed0
Au0.618
Energy-23.5
Binding len47
Me-10.282
Phylopstem3.01868452
Phylopflank4.0890857475
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure