Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCCTGTGCTTGTCCCTGCAG&GCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCGAAAACAGGCC
.((((((((((((((((((..&))))))))........................))))..............)))))).
Details
MiRNAhsa-miR-6811-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site46,103
Score0.846
Seed1
Au0.529
Energy-24.5
Binding len57
Me-3.793
Phylopstem0.4847406178571431
Phylopflank0.6063253245833332
Longest consecutive pairings8
Position of longest consecutive pairings49
Pairings in 3prime end6
Position5UTR
2D Structure