Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCCTGTGCTTGTCCCTGCAG&CTGGGTCAGAGGATGAGATGAAAGAAGCAGATGAGAGCACAGGA
..(((((((((....((((..&.))))....))))))))).
Details
MiRNAhsa-miR-6811-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1856,1900
Score0.846
Seed1
Au0.515
Energy-22.9
Binding len19
Me-11.185
Phylopstem2.607356288888889
Phylopflank3.9353164187500003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure