Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATGGGGTGAGATGGGGAGGAGCAGC&GTTGCTTTATGCCAGAGTGGTTTACCCCATT
(((((((((..(((.(.((((((((&)))))))).).))).......))))))))).
Details
MiRNAhsa-miR-6812-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2631,2662
Score0.942
Seed1
Au0.676
Energy-24.7
Binding len31
Me-8.74
Phylopstem5.735276444444444
Phylopflank3.871517323749999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure