Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGGGCTGGGGTTTCAGGTTCT&GACCTGAACTTTAATCAGTCTGCACATCCTGT
((((((((((((.((((((((..&))))))))))....)))))).......)))).
Details
MiRNAhsa-miR-6813-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2017,2049
Score0.923
Seed1
Au0.647
Energy-18.9
Binding len32
Me-5.227
Phylopstem3.050811739130435
Phylopflank3.394404015
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end6
Position3UTR
2D Structure