Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGCTTCTCTTGCACACCCAG&CTGGGCTGCAGATGGTTGGAGATGGAAAATAATGATAGCAAATGCTAATAAGCCT
.(((((((((((((..(((((&))))).)))).......)))))............................)))).
Details
MiRNAhsa-miR-6815-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1434,1489
Score0.846
Seed1
Au0.632
Energy-17.7
Binding len55
Me-4.762
Phylopstem3.302162558333333
Phylopflank3.2250405025000006
Longest consecutive pairings5
Position of longest consecutive pairings50
Pairings in 3prime end6
PositionCDS
2D Structure