Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGCGGGGCAGGTCCCTGC&GCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCG
...((((((((((((((((((&)))))))))...........................)))).))))).
Details
MiRNAhsa-miR-6816-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site46,93
Score1.0
Seed0
Au0.515
Energy-28.2
Binding len47
Me-6.515
Phylopstem0.545537343478261
Phylopflank0.5533802658333333
Longest consecutive pairings9
Position of longest consecutive pairings38
Pairings in 3prime end8
Position5UTR
2D Structure