Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGCGGCAGAGCTGGGGTCA&TGATCCTTCTGCCGTC
.((((((((...(((((((&))))))))))))))).
Details
MiRNAhsa-miR-6820-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site975,991
Score0.923
Seed1
Au0.544
Energy-22.2
Binding len16
Me-11.207
Phylopstem5.577010375
Phylopflank4.8628102687500006
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure