Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGCTCTAACTGGCTTTCCCTGCA&GCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCG
.(((....((.((((((((((((.&))))))).........................)))))))....))).
Details
MiRNAhsa-miR-6822-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site46,93
Score0.923
Seed0
Au0.515
Energy-21.0
Binding len47
Me-16.495
Phylopstem0.5678255081081082
Phylopflank0.2850573883333333
Longest consecutive pairings7
Position of longest consecutive pairings40
Pairings in 3prime end7
Position5UTR
2D Structure