Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGCTCTAACTGGCTTTCCCTGCA&TGCAGAAACTTTTGATAGTGGAAGGTTGGCTGGATGGGTCTT
((((((((.(((((((((((((((&)))))..............)))))))))).))))...)))).
Details
MiRNAhsa-miR-6822-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site306,348
Score0.846
Seed1
Au0.603
Energy-20.2
Binding len42
Me-4.994
Phylopstem1.9561923103448278
Phylopflank2.3089948712499995
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure