Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGAGCCATGAGGGTCTGTGC&GCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGTGGTGAGTGGAAACCTCCCAT
((((((((((((((((((((((&))))...)))))))).............................))))....)))))).
Details
MiRNAhsa-miR-6827-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1147,1206
Score0.949
Seed1
Au0.559
Energy-20.7
Binding len59
Me-3.938
Phylopstem3.480396206896551
Phylopflank4.6162156337499995
Longest consecutive pairings8
Position of longest consecutive pairings44
Pairings in 3prime end8
PositionCDS
2D Structure