Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATCTGCTCTCTTGTTCCCAG&CTGAGGAATGGGATGAAAGAGCAA
...(((((((((((((((((&))).))))))))).....))))).
Details
MiRNAhsa-miR-6828-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site944,968
Score0.846
Seed0
Au0.588
Energy-18.3
Binding len24
Me-6.515
Phylopstem4.756956152173912
Phylopflank4.89819991125
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure