Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTCTCTCTCCACTTCCTCAG&CTGAGGAATGGGATGAAAGAGC
.((((.(((((..((((((((&))))))))..))).)).)))).
Details
MiRNAhsa-miR-6833-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site944,966
Score0.846
Seed0
Au0.588
Energy-19.6
Binding len22
Me-10.33
Phylopstem5.142052874999999
Phylopflank4.845303598750002
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure