Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGCAGCAGTGGCAAGACTCCT&GAGCTGTCACTGCC
.....((((((((.((.(((..&))))))))))))).
Details
MiRNAhsa-miR-6838-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site78,92
Score0.846
Seed0
Au0.5
Energy-18.1
Binding len14
Me-14.522
Phylopstem0.422169375
Phylopflank0.5422629375000001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure