Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCCCAGGACTTTGTGCGGGGTG&CAGTCTGCACATCCTGT
...(((((...((((((((.((&)).))))))))))))).
Details
MiRNAhsa-miR-6840-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2032,2049
Score1.0
Seed0
Au0.647
Energy-20.2
Binding len17
Me-11.638
Phylopstem0.847055
Phylopflank3.6908345025000004
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure