Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTTGCATCTGCATCCCCAG&CTGGAATGAAGACACGGATGGAGAATGGGAGGC
.((((.(((((.(((((((((&))))...........))))).))).)).)))).
Details
MiRNAhsa-miR-6841-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1116,1149
Score0.923
Seed0
Au0.515
Energy-21.8
Binding len33
Me-9.041
Phylopstem3.5376830999999997
Phylopflank3.787392131249999
Longest consecutive pairings5
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure