Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGGTGGTCTCTAGCCAAGG&CCTGCTGGCTGGCTTGATGATGAACCAAAATTTATCCCTG
.((((((((((.((((((((((&)))..)))))))...)))..............))))))).
Details
MiRNAhsa-miR-6842-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1051,1091
Score0.846
Seed1
Au0.559
Energy-19.6
Binding len40
Me-7.14
Phylopstem4.519087833333334
Phylopflank5.0065897375
Longest consecutive pairings7
Position of longest consecutive pairings28
Pairings in 3prime end8
PositionCDS
2D Structure