Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGGTGGTCTCTAGCCAAGG&GCTGAAGGGCACCCA
...(((((.(((.((((.....&)))).))).))))).
Details
MiRNAhsa-miR-6842-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1516,1531
Score0.808
Seed0
Au0.559
Energy-18.6
Binding len15
Me-8.86
Phylopstem2.7185373999999998
Phylopflank3.4078106399999992
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure