Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATGGTCTCCTGTTCTCTGCAG&CTGGAATGAAGACACGGATGGAGAATGGGAGGCA
...((((((((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-6843-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1116,1150
Score1.0
Seed0
Au0.515
Energy-22.5
Binding len16
Me-6.515
Phylopstem3.584296428571428
Phylopflank3.7115045999999996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure