Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGGGCCAGAGCAGAGAGC&GCTCTTGGTTTAGAGCTTTGGTCTA
..((((((((((.((((((&))))))........)))))))))).
Details
MiRNAhsa-miR-6845-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1348,1373
Score0.846
Seed1
Au0.647
Energy-20.6
Binding len25
Me-6.246
Phylopstem4.1942785
Phylopflank3.18755033
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure