Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTCTCCTCCCTGTGCCCCAG&CTGTTCGGAAAAGGAAGTAGCAGATCACTGGGCTGCAGATGGTTGGAGATGGA
(((((((..(((.((((((((&.)))))..))).).))..))))).)).
Details
MiRNAhsa-miR-6845-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1407,1460
Score1.0
Seed1
Au0.588
Energy-24.8
Binding len27
Me-8.597
Phylopstem3.7565576
Phylopflank3.5205014875000002
Longest consecutive pairings5
Position of longest consecutive pairings21
Pairings in 3prime end8
PositionCDS
2D Structure