Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGCTCATGTGTCTGTCCTCTTC&GAGAGCACAGGATCTGGAGATGGGCCG
(((((((.(.(((((.(((((.&))))).)))).....).).))))))).
Details
MiRNAhsa-miR-6847-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1888,1915
Score0.846
Seed1
Au0.529
Energy-20.7
Binding len27
Me-7.727
Phylopstem2.0538247142857147
Phylopflank4.46412243
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure