Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGGCTGGGATGGGCCATGGT&ACCAAGTGGCAACGACTTGGACATCTGAGCTGTCAC
(((.((((.(((((.((((((((&))))..))))...........))))).)))).))).
Details
MiRNAhsa-miR-6848-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site52,88
Score0.846
Seed0
Au0.471
Energy-22.6
Binding len36
Me-8.761
Phylopstem0.44121309999999997
Phylopflank0.3393309425
Longest consecutive pairings5
Position of longest consecutive pairings10
Pairings in 3prime end8
Position5UTR
2D Structure