Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGGCTGGGATGGGCCATGGT&GCCTTTTGGCTATGTTTGGGTCTTCT
.(((((((.((((.(((((.(((&)))...)))))..)))).))))))).
Details
MiRNAhsa-miR-6848-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site133,159
Score0.923
Seed1
Au0.632
Energy-21.8
Binding len26
Me-5.707
Phylopstem1.9398695714285714
Phylopflank1.01049982625
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure