Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCCTGGGGTTCTGAGGACATG&GTGAACTTTCCTCAGAGATTAAATATAAGACACCTCAACCTATAGGA
.((((((((((((((((....&.)))))))).....................)))).)))).
Details
MiRNAhsa-miR-6852-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site248,295
Score0.923
Seed1
Au0.676
Energy-18.4
Binding len40
Me-3.793
Phylopstem2.292258886842104
Phylopflank2.11126302875
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end4
PositionCDS
2D Structure