Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCGTGGGATGTCCATGAAGTCAG&TGGCAACGACTTGGACATCTGAGCTG
(((.(.(((((((((...((((..&.))))))))))))).)))).
Details
MiRNAhsa-miR-6853-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site58,84
Score0.923
Seed0
Au0.412
Energy-22.3
Binding len20
Me-9.104
Phylopstem0.5554734444444445
Phylopflank0.32600077875000005
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end4
Position5UTR
2D Structure