Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGCTCAGGTTTGAGAACTGCTGA&GGTAGTTCTATAATAAAAATGAGCA
..(((((..(((((((((((((..&)))))))))....))))..))))).
Details
MiRNAhsa-miR-6854-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2332,2357
Score0.846
Seed0
Au0.706
Energy-20.1
Binding len25
Me-8.327
Phylopstem4.452070176470588
Phylopflank4.464820308749999
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end6
Position3UTR
2D Structure