Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGAGAGGAGCAGTGGTGCTGTGG&GCAGCTTCATTGCTA
........((((((((.(((((..&))))).)))))))).
Details
MiRNAhsa-miR-6856-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2262,2277
Score0.846
Seed0
Au0.691
Energy-18.9
Binding len15
Me-19.424
Phylopstem4.7412578875
Phylopflank4.636022964999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure