Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGCCAGCCCCTGCTCACCCCT&AGGTACCTGGTGACAGAGGACTGGTA
..(((((((.(((.((((((((&))).....)))))))).)).))))).
Details
MiRNAhsa-miR-6858-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site431,457
Score1.0
Seed1
Au0.603
Energy-22.5
Binding len26
Me-7.056
Phylopstem2.429647153846154
Phylopflank3.3444133837499996
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure