Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGCCAGCCCCTGCTCACCCCT&AGGAAGTAGCAGATCACTGGGCTGCAGATGGTTGG
(((((((((((((((.((.(((&)))..)))))))......)))))......))))).
Details
MiRNAhsa-miR-6858-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1418,1453
Score0.846
Seed1
Au0.588
Energy-20.5
Binding len35
Me-4.171
Phylopstem4.1173878148148155
Phylopflank2.9155094650000004
Longest consecutive pairings7
Position of longest consecutive pairings23
Pairings in 3prime end6
PositionCDS
2D Structure