Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTGGGCAGGGCTGTGGTGAGT&GCAGCCCTGGAAAAACCAATGGACCTGGA
.((((((((((((((.......&)))))))))..............))))).
Details
MiRNAhsa-miR-6860
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1702,1731
Score0.923
Seed1
Au0.574
Energy-20.0
Binding len29
Me-4.026
Phylopstem3.6678082321428573
Phylopflank3.80124175875
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end1
PositionCDS
2D Structure