Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTGGGTAGGTGGGGCTCCAGG&TCTGGAGTCCTCGAAAAATTCCTAATCCAGA
.(((((((((.(((((((((((&))))))))))).........)))).))))).
Details
MiRNAhsa-miR-6861-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1274,1305
Score1.0
Seed1
Au0.618
Energy-26.5
Binding len31
Me-6.618
Phylopstem3.586968
Phylopflank4.25326431375
Longest consecutive pairings11
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure